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Curriculum vitae

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Contact Information

hanalee07 at gmail dot com

Education

(Dec 2012) Ph.D. Molecular & Cell Biology with Designated Emphasis in Computational & Genomic Biology
University of California, Berkeley
Dissertation: "Investigating genetic determinants of phenotypic variation in natural isolates of Saccharomyces cerevisiae"

(Jun 2007) A.B. cum laude with High Honors in Biochemical Sciences
Harvard University
Honors thesis: "Array-based high-resolution genotyping of recombinant inbred lines for quantitative trait loci analysis"

Research Experience

(2013-2015) Postdoctoral researcher with Dr. Joy Bergelson
Department of Ecology & Evolution, University of Chicago

(2007-2013) Graduate student researcher with Dr. Rachel Brem
Department of Molecular & Cell Biology, University of California, Berkeley

(2007-2008) Rotation student with Dr. Rachel Brem, Dr. Michael Eisen, and Dr. Michael Levine
Department of Molecular & Cell Biology, University of California, Berkeley

(2004-2007) Undergraduate researcher with Dr. Christine Queitsch
FAS Center for Systems Biology, Harvard University

Publications

Lee HN, Mostovoy Y, Hsu TY, Chang AH, Brem RB (2013). Divergence of iron metabolism in wild Malaysian yeast. G3: Genes, Genomes, Genetics 3(12): 2187-2194. doi: 10.1534/g3.113.008011

Lee HN, Magwene PM, Brem RB (2011). Natural variation in CDC28 underlies morphological phenotypes in an environmental yeast isolate. Genetics 188(3): 723-730. doi: 10.1534/genetics.111.128819

Sangster TA, Salathia N, Lee HN, Watanabe E, Schellenberg K, Morneau K, Wang H, Undurraga S, Queitsch C, Lindquist S (2008). HSP90-buffered genetic variation is common in Arabidopsis thaliana. Proceedings of the National Academy of Sciences 105(8): 2969-2974. doi: 10.1073/pnas.0712210105

Salathia N, Lee HN, Sangster TA, Morneau K, Landry CR, Schellenberg K, Behere AS, Gunderson KL, Cavalieri D, Jander G, et al. (2007). Indel arrays: an affordable alternative for genotyping. The Plant Journal 51(4): 727-737. doi: 10.1111/j.1365-313X.2007.03194.x

Honors and Awards

(2013-2015) V. Dropkin Postdoctoral Fellowship

(2009-2011) Paul and Daisy Soros Fellowship for New Americans

(2009) NSF Graduate Research Fellowship Program Honorable Mention

(2007-2009) NIH Genetics Predoctoral Training Grant

(2007) Thomas T. Temple Hoopes Prize

(2007) NSF Graduate Research Fellowship Program Honorable Mention

Teaching Experience

(Spr 2012) Workshop instructor for RNA-Seq Data Analysis Workshop
Computational Genomics Resource Laboratory, University of California, Berkeley

(Spr 2010) Graduate student instructor for MCB 240L: Genetics Laboratory
Department of Molecular & Cell Biology, University of California, Berkeley

(Fall 2008) Graduate student instructor for MCB 142: Survey of General Genetics
Department of Molecular & Cell Biology, University of California, Berkeley

Professional Meetings

(Jun 2013) Society for Molecular Biology and Evolution

(Jul 2011) Gordon Research Conference on Ecological & Evolutionary Genomics
Poster: "Using population genomic data to investigate morphological variation in Saccharomyces cerevisiae"

(Aug 2006) American Society for Plant Biologists

Programming Skills

Interpreted languages: R, Python, Perl
Bioinformatics software: bowtie, samtools, Bioconductor
Database management: SQLite
Version control: Git, Mercurial
Markup languages: HTML, CSS, LaTeX
Web framework: Django

Professional Affiliations

(2013-2015) Genetics Society of America

(2013-2015) Society for Molecular Biology and Evolution

(2013-2015) National Postdoctoral Association

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